PoplarV1, Main, Exploration, bibRecord, 000046

Transcription factor LkWOX4 is involved in adventitious root development in Larix kaempferi.

Identifieur interne : 000046 ( Main/Exploration ); précédent : 000045; suivant : 000047

Transcription factor LkWOX4 is involved in adventitious root development in Larix kaempferi.

Auteurs : Hongming Wang [République populaire de Chine] ; Yunhui Xie [République populaire de Chine] ; Wusheng Liu [États-Unis] ; Guiyun Tao [République populaire de Chine] ; Chao Sun [République populaire de Chine] ; Xiaomei Sun [République populaire de Chine] ; Shougong Zhang [République populaire de Chine]

Source :

Gene [ 1879-0038 ] ; 2020.

RBID : pubmed:32640309

Descripteurs français

English descriptors

KwdEn :
- Abscisic Acid (metabolism), Cloning, Molecular (MeSH), Cyclopentanes (metabolism), Gene Expression Regulation, Developmental (genetics), Gene Expression Regulation, Plant (genetics), Homeodomain Proteins (genetics), Indoleacetic Acids (metabolism), Larix (genetics), Larix (growth & development), Meristem (genetics), Meristem (growth & development), Organogenesis, Plant (genetics), Oxylipins (metabolism), Signal Transduction (genetics), Transcription Factors (genetics).
MESH :
- chemical , genetics : Homeodomain Proteins, Transcription Factors.
- chemical , metabolism : Abscisic Acid, Cyclopentanes, Indoleacetic Acids, Oxylipins.
- genetics : Gene Expression Regulation, Developmental, Gene Expression Regulation, Plant, Larix, Meristem, Organogenesis, Plant, Signal Transduction.
- growth & development : Larix, Meristem.
- Cloning, Molecular.

Abstract

WUSCHEL-related homeobox4 (WOX4) plays important roles in vascular formation and adventitious root (AR) development. Here, we cloned the WOX4 from the AR of Larix kaempferi, whose cDNA is 1452 bp in length and encodes 483 amino acids. LkWOX4 is mainly expressed in the layer formation area of the stem at 10 days after cutting and its expression levels in the middles and ends of the ARs were higher than that in the AR tips. The fused protein LkWOX4-GFP localized in the nucleus. The heterologous overexpression of LkWOX4 in 84 K poplar significantly increased AR numbers and decreased AR lengths. In LkWOX4 plants, the endogenous jasmonic acid and abscisic acid contents significantly decreased in stems, while the auxin, jasmonic acid and abscisic acid contents significantly increased in ARs. RNA-Seq of those LkWOX4 overexpression poplar plants showed that the expression of plant hormone signaling genes (ARF2, ARF3, ARF7 and ARF18), rooting-related transcription factors (WOX5, LBD29 and SCR) and root development-related genes (CYCD3, GRF1 and TAA1) were affected. Moreover, we found that LkWOX4 interacts with LkPAT18, LkACBP6, and LkCIP7 using yeast two hybrid screening. Thus, we found LkWOX4 involves in the AR initiation and development, which might be regulated through the IAA, JA and ABA signaling pathways.

DOI: 10.1016/j.gene.2020.144942
PubMed: 32640309

Affiliations:

Links toward previous steps (curation, corpus...)

to stream Main, to step Corpus: 000206
to stream Main, to step Curation: 000206

Le document en format XML

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<term>Cloning, Molecular (MeSH)</term>
<term>Cyclopentanes (metabolism)</term>
<term>Gene Expression Regulation, Developmental (genetics)</term>
<term>Gene Expression Regulation, Plant (genetics)</term>
<term>Homeodomain Proteins (genetics)</term>
<term>Indoleacetic Acids (metabolism)</term>
<term>Larix (genetics)</term>
<term>Larix (growth & development)</term>
<term>Meristem (genetics)</term>
<term>Meristem (growth & development)</term>
<term>Organogenesis, Plant (genetics)</term>
<term>Oxylipins (metabolism)</term>
<term>Signal Transduction (genetics)</term>
<term>Transcription Factors (genetics)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr"><term>Acide abscissique (métabolisme)</term>
<term>Acides indolacétiques (métabolisme)</term>
<term>Clonage moléculaire (MeSH)</term>
<term>Cyclopentanes (métabolisme)</term>
<term>Facteurs de transcription (génétique)</term>
<term>Larix (croissance et développement)</term>
<term>Larix (génétique)</term>
<term>Méristème (croissance et développement)</term>
<term>Méristème (génétique)</term>
<term>Organogenèse des plantes (génétique)</term>
<term>Oxylipines (métabolisme)</term>
<term>Protéines à homéodomaine (génétique)</term>
<term>Régulation de l'expression des gènes au cours du développement (génétique)</term>
<term>Régulation de l'expression des gènes végétaux (génétique)</term>
<term>Transduction du signal (génétique)</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>Homeodomain Proteins</term>
<term>Transcription Factors</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Abscisic Acid</term>
<term>Cyclopentanes</term>
<term>Indoleacetic Acids</term>
<term>Oxylipins</term>
</keywords>
<keywords scheme="MESH" qualifier="croissance et développement" xml:lang="fr"><term>Larix</term>
<term>Méristème</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Gene Expression Regulation, Developmental</term>
<term>Gene Expression Regulation, Plant</term>
<term>Larix</term>
<term>Meristem</term>
<term>Organogenesis, Plant</term>
<term>Signal Transduction</term>
</keywords>
<keywords scheme="MESH" qualifier="growth & development" xml:lang="en"><term>Larix</term>
<term>Meristem</term>
</keywords>
<keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Facteurs de transcription</term>
<term>Larix</term>
<term>Méristème</term>
<term>Organogenèse des plantes</term>
<term>Protéines à homéodomaine</term>
<term>Régulation de l'expression des gènes au cours du développement</term>
<term>Régulation de l'expression des gènes végétaux</term>
<term>Transduction du signal</term>
</keywords>
<keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr"><term>Acide abscissique</term>
<term>Acides indolacétiques</term>
<term>Cyclopentanes</term>
<term>Oxylipines</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Cloning, Molecular</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr"><term>Clonage moléculaire</term>
</keywords>
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<front><div type="abstract" xml:lang="en">WUSCHEL-related homeobox4 (WOX4) plays important roles in vascular formation and adventitious root (AR) development. Here, we cloned the WOX4 from the AR of Larix kaempferi, whose cDNA is 1452 bp in length and encodes 483 amino acids. LkWOX4 is mainly expressed in the layer formation area of the stem at 10 days after cutting and its expression levels in the middles and ends of the ARs were higher than that in the AR tips. The fused protein LkWOX4-GFP localized in the nucleus. The heterologous overexpression of LkWOX4 in 84 K poplar significantly increased AR numbers and decreased AR lengths. In LkWOX4 plants, the endogenous jasmonic acid and abscisic acid contents significantly decreased in stems, while the auxin, jasmonic acid and abscisic acid contents significantly increased in ARs. RNA-Seq of those LkWOX4 overexpression poplar plants showed that the expression of plant hormone signaling genes (ARF2, ARF3, ARF7 and ARF18), rooting-related transcription factors (WOX5, LBD29 and SCR) and root development-related genes (CYCD3, GRF1 and TAA1) were affected. Moreover, we found that LkWOX4 interacts with LkPAT18, LkACBP6, and LkCIP7 using yeast two hybrid screening. Thus, we found LkWOX4 involves in the AR initiation and development, which might be regulated through the IAA, JA and ABA signaling pathways.</div>
</front>
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<DateCompleted><Year>2020</Year>
<Month>09</Month>
<Day>08</Day>
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<DateRevised><Year>2020</Year>
<Month>09</Month>
<Day>08</Day>
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<Day>20</Day>
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<Title>Gene</Title>
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<ArticleTitle>Transcription factor LkWOX4 is involved in adventitious root development in Larix kaempferi.</ArticleTitle>
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<Abstract><AbstractText>WUSCHEL-related homeobox4 (WOX4) plays important roles in vascular formation and adventitious root (AR) development. Here, we cloned the WOX4 from the AR of Larix kaempferi, whose cDNA is 1452 bp in length and encodes 483 amino acids. LkWOX4 is mainly expressed in the layer formation area of the stem at 10 days after cutting and its expression levels in the middles and ends of the ARs were higher than that in the AR tips. The fused protein LkWOX4-GFP localized in the nucleus. The heterologous overexpression of LkWOX4 in 84 K poplar significantly increased AR numbers and decreased AR lengths. In LkWOX4 plants, the endogenous jasmonic acid and abscisic acid contents significantly decreased in stems, while the auxin, jasmonic acid and abscisic acid contents significantly increased in ARs. RNA-Seq of those LkWOX4 overexpression poplar plants showed that the expression of plant hormone signaling genes (ARF2, ARF3, ARF7 and ARF18), rooting-related transcription factors (WOX5, LBD29 and SCR) and root development-related genes (CYCD3, GRF1 and TAA1) were affected. Moreover, we found that LkWOX4 interacts with LkPAT18, LkACBP6, and LkCIP7 using yeast two hybrid screening. Thus, we found LkWOX4 involves in the AR initiation and development, which might be regulated through the IAA, JA and ABA signaling pathways.</AbstractText>
<CopyrightInformation>Copyright © 2020. Published by Elsevier B.V.</CopyrightInformation>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Wang</LastName>
<ForeName>Hongming</ForeName>
<Initials>H</Initials>
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</AffiliationInfo>
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<Author ValidYN="Y"><LastName>Xie</LastName>
<ForeName>Yunhui</ForeName>
<Initials>Y</Initials>
<AffiliationInfo><Affiliation>State Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Tree Breeding and Cultivation of State Forestry and Grassland Administration, Research Institute of Forestry, Chinese Academy of Forestry, Beijing 100091, China.</Affiliation>
</AffiliationInfo>
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<AffiliationInfo><Affiliation>Department of Horticultural Science, North Carolina State University, Raleigh 27695, USA.</Affiliation>
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<Author ValidYN="Y"><LastName>Tao</LastName>
<ForeName>Guiyun</ForeName>
<Initials>G</Initials>
<AffiliationInfo><Affiliation>State Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Tree Breeding and Cultivation of State Forestry and Grassland Administration, Research Institute of Forestry, Chinese Academy of Forestry, Beijing 100091, China.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Sun</LastName>
<ForeName>Chao</ForeName>
<Initials>C</Initials>
<AffiliationInfo><Affiliation>State Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Tree Breeding and Cultivation of State Forestry and Grassland Administration, Research Institute of Forestry, Chinese Academy of Forestry, Beijing 100091, China.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Sun</LastName>
<ForeName>Xiaomei</ForeName>
<Initials>X</Initials>
<AffiliationInfo><Affiliation>State Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Tree Breeding and Cultivation of State Forestry and Grassland Administration, Research Institute of Forestry, Chinese Academy of Forestry, Beijing 100091, China.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Zhang</LastName>
<ForeName>Shougong</ForeName>
<Initials>S</Initials>
<AffiliationInfo><Affiliation>State Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Tree Breeding and Cultivation of State Forestry and Grassland Administration, Research Institute of Forestry, Chinese Academy of Forestry, Beijing 100091, China. Electronic address: larch_rif@163.com.</Affiliation>
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<Month>07</Month>
<Day>05</Day>
</ArticleDate>
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<MedlineTA>Gene</MedlineTA>
<NlmUniqueID>7706761</NlmUniqueID>
<ISSNLinking>0378-1119</ISSNLinking>
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<ChemicalList><Chemical><RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D003517">Cyclopentanes</NameOfSubstance>
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<Chemical><RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D018398">Homeodomain Proteins</NameOfSubstance>
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<Chemical><RegistryNumber>6RI5N05OWW</RegistryNumber>
<NameOfSubstance UI="C011006">jasmonic acid</NameOfSubstance>
</Chemical>
<Chemical><RegistryNumber>72S9A8J5GW</RegistryNumber>
<NameOfSubstance UI="D000040">Abscisic Acid</NameOfSubstance>
</Chemical>
</ChemicalList>
<CitationSubset>IM</CitationSubset>
<MeshHeadingList><MeshHeading><DescriptorName UI="D000040" MajorTopicYN="N">Abscisic Acid</DescriptorName>
<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D003001" MajorTopicYN="N">Cloning, Molecular</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D003517" MajorTopicYN="N">Cyclopentanes</DescriptorName>
<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D018507" MajorTopicYN="N">Gene Expression Regulation, Developmental</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D018506" MajorTopicYN="N">Gene Expression Regulation, Plant</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D018398" MajorTopicYN="N">Homeodomain Proteins</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D007210" MajorTopicYN="N">Indoleacetic Acids</DescriptorName>
<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D028221" MajorTopicYN="N">Larix</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
<QualifierName UI="Q000254" MajorTopicYN="Y">growth & development</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D018519" MajorTopicYN="N">Meristem</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
<QualifierName UI="Q000254" MajorTopicYN="Y">growth & development</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D063246" MajorTopicYN="N">Organogenesis, Plant</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D054883" MajorTopicYN="N">Oxylipins</DescriptorName>
<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D015398" MajorTopicYN="N">Signal Transduction</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D014157" MajorTopicYN="N">Transcription Factors</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
</MeshHeading>
</MeshHeadingList>
<KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Adventitious root</Keyword>
<Keyword MajorTopicYN="N">Interaction protein</Keyword>
<Keyword MajorTopicYN="N">Larch</Keyword>
<Keyword MajorTopicYN="N">LkWOX4</Keyword>
<Keyword MajorTopicYN="N">RNA-Seq</Keyword>
</KeywordList>
<CoiStatement>Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.</CoiStatement>
</MedlineCitation>
<PubmedData><History><PubMedPubDate PubStatus="received"><Year>2019</Year>
<Month>12</Month>
<Day>22</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="revised"><Year>2020</Year>
<Month>06</Month>
<Day>20</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="accepted"><Year>2020</Year>
<Month>07</Month>
<Day>01</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="pubmed"><Year>2020</Year>
<Month>7</Month>
<Day>9</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="medline"><Year>2020</Year>
<Month>9</Month>
<Day>9</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="entrez"><Year>2020</Year>
<Month>7</Month>
<Day>9</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
</History>
<PublicationStatus>ppublish</PublicationStatus>
<ArticleIdList><ArticleId IdType="pubmed">32640309</ArticleId>
<ArticleId IdType="pii">S0378-1119(20)30611-9</ArticleId>
<ArticleId IdType="doi">10.1016/j.gene.2020.144942</ArticleId>
</ArticleIdList>
</PubmedData>
</pubmed>
<affiliations><list><country><li>République populaire de Chine</li>
<li>États-Unis</li>
</country>
<settlement><li>Pékin</li>
</settlement>
</list>
<tree><country name="République populaire de Chine"><noRegion><name sortKey="Wang, Hongming" sort="Wang, Hongming" uniqKey="Wang H" first="Hongming" last="Wang">Hongming Wang</name>
</noRegion>
<name sortKey="Sun, Chao" sort="Sun, Chao" uniqKey="Sun C" first="Chao" last="Sun">Chao Sun</name>
<name sortKey="Sun, Xiaomei" sort="Sun, Xiaomei" uniqKey="Sun X" first="Xiaomei" last="Sun">Xiaomei Sun</name>
<name sortKey="Tao, Guiyun" sort="Tao, Guiyun" uniqKey="Tao G" first="Guiyun" last="Tao">Guiyun Tao</name>
<name sortKey="Xie, Yunhui" sort="Xie, Yunhui" uniqKey="Xie Y" first="Yunhui" last="Xie">Yunhui Xie</name>
<name sortKey="Zhang, Shougong" sort="Zhang, Shougong" uniqKey="Zhang S" first="Shougong" last="Zhang">Shougong Zhang</name>
</country>
<country name="États-Unis"><noRegion><name sortKey="Liu, Wusheng" sort="Liu, Wusheng" uniqKey="Liu W" first="Wusheng" last="Liu">Wusheng Liu</name>
</noRegion>
</country>
</tree>
</affiliations>
</record>

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Transcription factor LkWOX4 is involved in adventitious root development in Larix kaempferi.

Transcription factor LkWOX4 is involved in adventitious root development in Larix kaempferi.

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